Agricultural
land gets poor after long term cultivation. To supplement the soil nutrient
content under conventional farming system, we apply fertilizers. But this in
turn pollute the ecosystem. These chemicals enter our food chain sometimes, and
can be detrimental to us. In order to make agriculture sustainable, we need a balanced
and responsible organic agriculture. Organic farming excludes the use of any
chemical. The soil health and biodiversity is built up to sustain the plant
growth for longer term. Use of biofertilizers in crop production help build up
soil biological properties under organic farming.
Bio-fertilizers
include selective organisms like bacteria, fungi and algae. These are capable
of fixing atmospheric nitrogen and solubilization of native and added nutrients
like phosphorus, in the soil and make them available for plants. The nutrients
fixed by the soil microbes are more effective than outside application.
Biofertilizer
can be defined as a ready-to-use live preparation/formulation of beneficial
microorganisms, such as nitrogen fixers, phosphorus solubilizers, sulphur
oxidizers or organic matter decomposers which on application, increase the
availability of nutrients by their biological activity. When applied to seed,
plant surfaces, or soil, they colonize the rhizosphere or the interior of the
plant and promotes growth by increasing nutrients uptake.
Bio-fertilizers
are ecofriendly, cost effective and renewable source of plant nutrients. They
can play a vital role in maintaining long term soil fertility and
sustainability. They enhance the rate of mineralization of insoluble nutrients
in the soil through numerous natural process such as nitrogen fixation,
phosphorous fixation etc. They build up the soil micro-flora and there by the
soil health.
Advantages
There
are many advantages of using the biofertilizers. They form an important
association with other soil microbes and help in nutrient supply. Some basic
advantages as listed below:
- ·
Fixes atmospheric nitrogen.
- ·
Increase nutrient availability in
soil
- ·
Accelerates mineral uptake by plants
through solubilization or increased absorption.
- ·
Stimulate plant growth through
hormonal or antibiotics action or by decomposing organic waste.
- ·
They are cost-effective, hence,
reduced cost of cultivation.
- ·
Improves soil properties and
sustaining soil fertility. Lead to soil enrichment in the long term.
- ·
Are compatible with long term
sustainability.
- ·
Increases crop yield.
- ·
Provide resistance against drought
and soil-borne diseases
- ·
They are eco-friendly and pose no
damage to the environment.
Disadvantages
As
such there is no harmful impact of biofertilizers if it is used properly. Some
constraints include,
- ·
Specific to the plants.
- · Low acceptability of biofertilizers
because they do not produce quick and spectacular responses. Require skill in
production and application.
- ·
Difficult to store.
Some common biofertilizer organisms
are classified as follows:
Nitrogen fixing
|
Phosphorous solubilizing
|
Phosphorous mobilizing
|
Biofertilizers for Micronutrients
|
Plant Growth Promoting Rhizobacteria (PGPR)
|
Free-living:
Clostridium, Azotobacter, Nostoc,
Anabaena etc.
|
Bacteria:
Bacillus subtilis, Pseudomonas striata,
Bacillus circulans etc.
|
Arbuscular mycorrhiza:
Glomus sp., Acaulospora sp, Gigaspora
sp & Sclerocystis sp
|
Silicate and Zinc solubilizers: Bacillus sp
|
Pseudomonas:
Pseudomonas fluorescens
|
Symbiotic:
Rhizobium, Anabaena azollae, Frankia
etc.
|
Fungi: Aspergillus awamorii, Penicillium sp
|
Ectomycorrhiza:
Laccaria sp., Boletus sp., Amanita sp
|
|
|
Associative Symbiotic:
Azospirillum
|
|
Ericoid mycorrhizae:
Pezizella ericae
|
|
|
|
|
Orchid mycorrhiza:
Rhizoctonia solani
|
|
|
However, biofertilizers are not
popular because of many difficulties. Some of them are as follows:
- · Inadequate popularity is due to that
they cannot show instant and dramatic response like fertilizers. Inadequate
awareness about its use and benefits.
- ·
Lack of promotion, extension and
insufficient publicity.
- ·
Lack of availability of quality
products in time to the farmers in rural areas.
Nitrogen Fixing Biofertilizers
The nitrogen fixing bacteria work
under two conditions, symbiotically and as free living bacteria
(non-symbiotic). The symbiotic bacteria make an association with crop plants
through forming nodules in their roots. The free living bacteria do not form
any association but live freely and fix atmospheric nitrogen.
Symbiotic Nitrogen
fixers
1.
Rhizobium
The
maximum utilized among all the biofertilizers, Rhizobium
a symbiotic nitogen
fixing bacterium growing
in association with legumes. About 90% of legumes can become nodulated.
In the soil the bacteria are free living and motile, feeding on the remains of
dead organisms. Free living rhizobia cannot fix nitrogen and appear as straight
rods. The bacteria found in root nodules exists as irregular cells called bacteroids
which are often club and Y-shaped.
Several microbial genera are able to
form nitrogen-fixing nodules with legumes. These include Allorhizobium,
Azorhizobium, Bradyrhizobium, Mesorhizobium, Sinorhizobium, and Rhizobium - collectively
called the rhizobia. They have host specific associations with legumes.
Nitrogen fixing bacterium Rhizobium leguminosarum was isolated by Beijerinck (1888).
Ø Rhizobium meliloti, forms nodules on
alfalfa
Ø Bradyrhizobium japonicum forms a
symbiosis with soybean plants
Ø Sinorhizobium meliloti nitrogen-fixing
nodules on roots of white sweet clover
- Symbiotic nitrogen fixation by Rhizobia
Rhizobia live freely in the soil. When
they approach the plant root, the plant responds by producing chemicals such as
superoxide radicals, hydrogen peroxide, and N2O. The rhizobia which survive
with their antioxidant defenses can continue the infection process.
Only rhizobia and related genera
with sufficient antioxidant abilities are able to proceed to the next steps in
the infection process.
The plant roots release flavonoid
inducer molecules that stimulate rhizobial colonization of the root surfaces.
In response to this, rhizobia produce their own signaling compounds called Nod
factors. Once Nod factors are produced, the outer (epidermal) cells of the
roots gets altered and root hairs become deformed. In some cases, the root
hairs will curl to resemble a shepherd’s crook, entrapping bacteria. In
these regions, the plant cell wall is locally modified leading to the development
of a bacteria-filled, tubelike structure called the infection thread.
Attachment of Rhizobium to root hairs
involves specific bacterial proteins called rhicadhesins and host plant lectins
that affect the pattern of attachment and nod gene expression.
The infection thread grows toward the base of
the root hair cell, division of these root cells results in the formation of a nodule.
Bacteria are released from the infection thread into the nodule and each
bacterial cell differentiates into the nitrogen-fixing form called a bacteroid.
Bacteroids are terminally differentiated—they can neither divide nor revert
back to the non-differentiated state. Further growth and differentiation lead
to the development of a structure called a symbiosome.
Root Nodule Formation by Rhizobium.
- The plant root releases flavonoids that stimulate the production of various Nod metabolites by Rhizobium. There are many different Nod factors that control infection specificity.
- Attachment of Rhizobium to root hairs involves specific bacterial proteins called rhicadhesins and host plant lectins.
- A plant root hair covered with Rhizobium and undergoing curling.
- Initiation of bacterial penetration into the root hair cell and infection thread growth.
- Cell-to-cell spread of Rhizobium through infection threads followed by release of rhizobia and infection of host cells.
- Formation of bacteroids surrounded by plant-derived membranes and differentiation of bacteroids into nitrogen-fixing symbiosomes. The bacteria change morphologically and enlarge around 7 to 10 times in volume.
- The symbiosome contains the nitrogen-fixing bacteroid inside a peribacteroid membrane.
The symbiosomes within mature root nodules are the site of nitrogen fixation. Within these nodules, the differentiated bacteriods reduce atmospheric N2 to ammonium. In return they receive carbon and energy from their host legume. This creates an interdependent relationship.
The nitrogenase enzyme is very
sensitive to oxygen and to protect the nitrogenase, a protein called
leghemoglobin is present in the nodule. Leghemoglobin binds to oxygen and helps
maintain microaerobic conditions within the mature nodule. This protein is
similar in structure to myo- and hemoglobins found in animals; however, it has
a higher affinity for oxygen.
The genes essential for
nodulation (nod, nol, and noe genes) and nitrogen fixation (nif and
fix genes) show homology among rhizobia.
The molecular mechanisms by which
both the legume host and the rhizobial symbionts establish productive
nitrogen-fixing bacteriods within nodules continues to be an intense area of
research. A major goal of biotechnology is to introduce nitrogen fixation genes
into plants that do not normally form such associations.
Nitrogen fixation by rhizobia is
of great importance in agriculture in several ways. The supply of fixed nitrogen enables the growth of host plants in soils that would otherwise be nitrogen limiting. Legumes are the most successful plants maybe due to their symbiotic relationships with nitrogen-fixing bacteria on Earth. Legumes (peas, beans, lentils, soybeans, alfalfa and clover) help to feed
the meat-producing animals as well as humans. Crop yields are
greatly improved in nodulated plants; legumes can also grow well in poor soils
where there is not enough fixed nitrogen to support other types of plants.
After harvest legume roots left in the soil decay, releasing organic nitrogen
compounds for uptake by the next generation of plants. Farmers take advantage
of this natural fertilization by rotating a leguminous crop with a non
leguminous one.
Nitrogen fixation by natural means
cuts down on the use of artificial fertilizers. This not only saves money but
helps to prevent the many problems brought about by excessive use of commercial
nitrogen and ammonia fertilizers such as eutrophication of rivers and lakes,
generation of acid rain, and overgrowth of agricultural land by non-food crops.
2. Frankia
Frankia
is a gram-positive nitrogen-fixing filamentous free-living actinomycete found
in soil. It can form a symbiotic association with actinorhizal plants by
forming root nodules in some non-leguminous trees such as Casuarina and Alnus.
The bacteria can supply the nitrogen requirements of the host plant. As a
result, actinorhizal plants colonise and often thrive in soils that are low in
plant nutrients. The waste land soil fertility can be improved by growing
Casuarina.
Frankia
can fix the molecular nitrogen under free living conditions and in symbiotic association
with plants. The atmospheric nitrogen is fixed in the root nodules or vesicles,
where nitrogen fixing enzyme, nitrogenase, is localized. The vesicles have several
layers of hopanoids (a bacterial fatty ester) that create a lower oxygen
concentration, which is favourable for the oxygen-sensitive nitrogenase.
Frankia
inoculation can be advantageous in arid environments, disturbed sites and areas
where native actinorhizal plants are absent. Frankia combination should be selected
and customized for each target area and for each target species. Inoculation
and nodulation before seedling transplanting improves plant survival and performance.
Frankia spores can also be used for Casuarina inoculation.
Frankia nodules
in roots of alder
Non symbiotic Nitrogen fixer
1. Azotobacter
Azotobacter
is a heterotrophic free living aerobic nitrogen fixing bacteria present in
alkaline and neutral soils. Azotobacter was discovered in 1901 by Dutch
microbiologist and botanist Martinus Beijerinck. Azotobacter chroococcum, is the first aerobic, free-living nitrogen
fixer to be identified. Azotobacter chroococcum
is the most commonly occurring species in arable soils of India. Azotobacter agilis, Azotobacter
beijerinckii, Azotobacter nigricans, Azotobacter tropicalis, Azotobacter
vinelandii are some other common examples.
Apart
from its ability to fix atmospheric nitrogen in soils, it can also synthesize
growth promoting substances viz., auxins, and gibberellins and also to some
extent the vitamins. They also facilitate the mobility of heavy metals in the
soil, thus enhancing bioremediation of soil from heavy metals, such as cadmium,
mercury and lead. Many strains of Azotobactor also exhibit fungicidal
properties against certain species of fungus.
It
is used as a bio-fertilizer for all non-leguminous plants especially rice,
cotton, maize, sugarcane, pearl millet, vegetable and some plantation crops.
etc. Azotobacter cells are abundant in the rhizosphere region. Its population
is very low in uncultivated lands. Presence of organic matter in the soil
promotes its multiplication and nitrogen fixing capacity. Azotobacter produces slime
which aids in soil binding.
Field
experiments on Azotobacter indicated that this is suitable when inoculated with
seed or seedling of crop plants like onion, brinjal, tomato and cabbage under
different ago-climatic conditions. Azotobacter inoculation decreases the
requirement for nitrogenous fertilizers by 10 to 20% under normal field
conditions.
Associative Symbiotic Nitrogen fixer
1. Azospirillum
Azospirillum is a dominant soil microbe identified by Beijerinck in
1925. This Nitrogen fixing bacteria can form associative symbiosis on a large
variety of plants. It. colonizes the rhizosphere of non-leguminous graminaceous
plants and the intercellular spaces of root cortex.
So
far only four species of Azospirillum
have been identified. They are A.
lipoferum, A. brasilense, A. amazonense, A. iraquense. In Indian soils A.
brasilense and A. lipoferum are
very common. They reduce nitrate, perform denitrification etc.
It
is a free living or associative-symbiotic bacteria (does not form nodules but
makes association by living in the rhizosphere). Azospirillurn also forms a close associative symbiosis with the
higher plants. The bacteria live on root surface, sometimes also penetrates
into the root tissues but do not produce any visible nodule or out growth on
the root tissue. Azospirillum species establish an association with many plants
particularly with non-leguminous plants such as cereals, millets, oil seeds,
cotton, maize, sorghum, sugarcane etc
Azospirillum
is inoculated through seed, seedling root dip and soil application methods. The
Azospirillum inoculation helps better vegetative growth of the plants, saving
nitrogenous fertilizers by 25-30%. They fix nitrogen from 10 to 40 kg/ha.
Blue Green Algae (BGA) /Cyanobacteria as Bio-fertilizers
Blue-green
algae is another important class of biofertilizer. These are small organisms
appearing as a single cell or large accumulation of cells(colonies) or strings
of cells (trichomes). Blue-green algae are also known as cyanophytes,
cyanobacteria and cyanoprokaryotes. Cyanobacteria fix atmospheric nitrogen by forms,
i.e., free-living and symbiotic associations with partners such as water fern
Azolla, cycads, Gunnera, etc.
Some
cyanobacterial members are endowed with the specialized cells known as
heterocysts, which are thick-walled modified cells, which are considered site of nitrogen
fixation by nitrogenase enzyme. The heterocysts are modified vegetative cells,
which because of their thick walls and absence of photosynthesis, act as ideal
sites for nitrogen fixation under aerobic conditions. Although the nitrogenase is
present in vegetative cells, it remains inactive because of the presence of
oxygenic photosynthesis. The enzyme is a complex, catalyzes the conversion of
the molecular nitrogen into reduced form like ammonia. The fixed nitrogen
may be released in the form of ammonia, polypeptides, free amino acids,
vitamins, and auxin-like substances; either by secretion or by microbial
degradation after the cell death.
Nitrogen-fixing
ability has not only been shown by heterocystous cyanobacteria but also by
several non-heterocystous unicellular and filamentous genera. The species of
BGA, known to fix atmospheric nitrogen are grouped as 3 groups.
(i)
Heterocystous –aerobic forms (ii) Aerobic unicellular forms (iii)
Non-heterocystous, filamentous, micro aerophilic forms.
Form of Cyanobacteria
|
Cyanobacterial members
|
Unicellular
|
Chroococcidiopsis, Dermocapsa, Gloeocapsa
(Gloeothece)∗, Myxosarcina, Pleurocapsa∗,
Xenococcus
|
Filamentous heterocystous
|
Anabaena∗, Anabaenopsis, Aulosira, Calothrix∗, Camptylonema, Chlorogloea, Fischerella∗, Gloeotrichia, Nodularia, Nostoc∗, , Stigonema, Tolypothrix, Westiella,
|
Filamentous non-heterocystous
|
Lyngbya, Myxosarcina,
Oscillatoria, Schizothrix, Trichodesmium
|
∗Some
strains of these genera live symbiotically with other plants
Cyanobacteria
can contribute to about 20–30 kg N ha−1 as well as the organic matter to the
soil, quite significant for the economically weak farmers unable to invest for
costly chemical nitrogen fertilizer.
Many
Asian countries like China, Vietnam, India, etc. have been utilizing cyanobacteria
in paddy cultivation as the alternative to nitrogen fertilizers. Nitrogen availability to plants is increased due to application of
cyanobacteria in agriculture ecosystems, particularly the rice fields.
Inoculation of cyanobacteria (in vitro) in wheat crops, could enhance the plant
shoot/root length, dry weight, and yield. It
has also been suggested that cyanobacteria can improve the bioavailability of
phosphorus to the plants by solubilizing and mobilizing the insoluble organic
phosphates present in the soil with the help of phosphatase enzymes.
Nostoc
Nostoc
is a filamentous blue green alga usually formed of ball-like gelatinous
colonies composed of filaments called trichomes. Along the filament large,
spherical or cylindrical, colourless empty cells called heterocyst are found where
nitrogen fixation occurs. Terrestrial species are found abundantly in rice
fields where the soil is moist, mixed with many small plants like lichens,
mosses, etc., on moist rocks, bottom of lakes and springs. Nostoc sp. are found
also in paddy fields and stagnant water.
Nostoc
Gloeocapsa
Gloeocapsa
(Greek: gloia (gelatinous) and Latin: capsa (case) are single or clustered
cells enclosed in layers of mucilage. They are found on rocks or moist soils.
Some are symbiotic with fungi, forming lichens.
Gloeocapsa
Anabaena -Azolla system
Blue-Green alga, Anabaena azollae) forms a
symbiotic relationship with Azolla
(aquatic fern) and fixes atmospheric nitrogen. Azolla is a free-floating water fern that floats in water and fixes
atmospheric nitrogen. Azolla is
considered to be a potential bio-fertilizer in terms of nitrogen contribution
to rice. Anabaena azollae is
associated with the Azolla in the dorsal lobe of each vegetative leaf. Anabaena-Azolla is used in paddy fields where
the blue green algae perform photosynthesis as well as fix the atmospheric
nitrogen in flooded rice ecosystem.
Anabaena-Azolla
Azolla
is a fast growing water fern and can double its weight within a week. Azolla is
rich organic manure also. It mineralizes the soil nitrogen rapidly which is
made available to the crop in a very short period. Nitrogen release from Azolla
is slow but steady, without leaching losses. It also serves as a protein rich
feed to fish and poultry. The blue green algae also synthesize and liberate
some growth promoting substances viz., auxin and amino compounds which
stimulate the growth of rice plants. Cyanobacteria thus build up natural
fertility (C, N) in soil.
Application of Biofertilizers
Can be as seed treatment or seed inoculation/seedling root
dip.
Rhizobium:
For all legumes, Rhizobium is applied as seed inoculant.
Azospirillum/Azotobacter:
In the transplanted crops, Azospirillum is inoculated through seed, seedling
root dip and soil application methods. For direct sown crops, Azospirillum is
applied through seed treatment and soil application.
A
typical Blue green algal composite consists of Nostoc, Anabaena, Calothrix,
Tolypothrix, Plectonema, Aphanotleca, Gleocapsa, Oscillatoria, Cylindrospermum,
Aulosira and Scytonema and they are applied in rice fields mainly.
Conclusion
Biofertilizers are a vital component
for the soil fertility management in sustainable organic farming. Once they are
established, the soil fertility can be maintained over the years. Almost all
the essential plant nutrients can be supplied through biofertilizers to the
crops. They help enhance the absorption and make available the nutrient to the
plants. These microorganisms may be symbiotic, associated or free living in
nature. The use of these inoculants based upon effective quality control system
and powerful support machinery.
References
Text Book of Microbiology by Michael
J. Pelczar
http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.719.2177&rep=rep1&type=pdf
https://www.bio-fit.eu/q8/lo1-why-biofertilizers?start=4
http://eagri.org/eagri50/SSAC222/lec17.pdf