Thursday, April 15, 2021

SARS - Severe acute respiratory syndrome

  Severe acute respiratory syndrome (SARS) is a contagious and potentially fatal respiratory illness, which first appeared in China in November 2002, and scientists identified the virus that causes this serious form of viral pneumonia in 2003.

 The coronavirus SARS-CoV causes SARSSARS-CoV is related to SARS-CoV-2, the virus that causes COVID-19 infection.

 From 2002 to 2003, an outbreak of SARS spread across 24 countries. In 2003, this epidemic killed approximately 774 people worldwide before it was successfully contained. The World Health Organization designated SARS a global health threat The outbreak occurred from 2002 to 2003, but the disease is no longer circulating. No new cases of SARS have been reported since 2004.


 Causes

 

SARS was a zoonotic disease -of animal origin but passed on to humans.

 

The coronavirus SARS-CoV  typically causes upper respiratory tract illness, such as the common cold.

 

Seven different kinds of coronavirus can infect humans. Four of these are common, and most people will experience at least one of them during their life.

 

The three other coronaviruses cause:

The three most recent coronaviruses have all emerged since 2002 and are more likely to be life threatening than the previous ones.

 

 Symptoms 

Symptoms appear 2–7 days after a person was exposed to the virus- it could also take up to 10 days.

 

The first symptom is a high fever of more than 38.0°C. Other mild respiratory symptoms were similar to those of flu. Other early symptoms included:

  • aches
  • chills
  • diarrhea in 10–20% of people
  • a dry cough
  • head ache
  • body aches
  • loss of appetite
  • malaise
  • shortness of breath
  • low oxygen levels in the body known as hypoxia 

Breathing issues will appear within two to 10 days after a person is exposed to the virus. Health officials will quarantine a person who presents the above symptoms and family members if they have a history of foreign travel. The person will be quarantined for 10 days to prevent the virus from spreading.

 

Spread

 

Coronaviruses, such as SARS-CoV, spread through close human contact and in droplets from coughing and sneezing.  Human/Face-to-face contact can be:

  • caring for someone with SARS
  • having contact with the bodily fluids of a person with SARS
  • kissing, hugging, touching, or sharing utensils with an infected person

Also,

  • touching a surface contaminated with respiratory droplets from an infected person and then touching your eyes, mouth, or nose.
  • through the air, possibly.

 

The respiratory droplets are absorbed through the mucous membranes of the mouth, nose, and eyes. SARS-CoV might survive on a dry surface for extended periods, possibly for several months 

Factors which increase risk of contracting the disease include close contact with someone with SARS and a history of travel to any other country with a reported SARS outbreak.

 

Diagnosis

  • Various lab tests have been developed to detect the SARS virus-performed on nasal and throat swabs or blood samples.
  • A chest X-ray or CT scan may also reveal signs of pneumonia characteristic of SARS.
  • Virus is identified by electron microscopy, growth in Vero cell culture, animal inoculation, histology,  cloning, sequencing etc
  • Molecular and serological tests for rapid diagnosis developed
  • RT PCR for early diagnosis, ELISA for rise in antibody titre, Indirect immunoflourescent test for later tests 

Complications

  • Most of the fatalities associated with SARS result from respiratory failure.
  • SARS can also lead to long-term damage to liver, kidneys, heart and lungs
  • These complications are more likely in those more than 60 years of age who have been diagnosed with another chronic condition
  • Most people with SARS make a full recovery

 Treatment 

    • There is no confirmed treatment that works for every person who has SARS.
    • Antiviral medications and steroids are sometimes given to reduce lung swelling, but aren’t effective for everyone.
    • Supplemental oxygen or a ventilator may be prescribed if necessary.
    • Virus is highly mutable- so vaccine may not be easy though researchers are working on vaccine for SARS
    • Control by strict isolation and quarantine
    • Because there’s no confirmed treatment or cure for SARS, it’s important to take as many preventive measures as possible.

     To prevent transmission of SARS :

    • Wash  hands frequently.
    • Wear disposable gloves if touching any infected bodily fluids.
    • Wear a surgical mask when in the same room with a person with SARS.
    • Disinfect surfaces that may have been contaminated with the virus.
    • Wash all personal items, including bedding and utensils, used by a person with SARS.
    • Follow all of the above steps for at least 10 days after the symptoms of SARS have gone away.
    • Keep children home from school if they develop a fever or any breathing problems after coming in contact with someone with SARS.

Wednesday, April 14, 2021

Emergence and mechanism of Drug Resistance

 The spread of drug-resistant pathogens is one of the most serious threats to public health.

The antimicrobial drugs are prepared and used widely but many diseases are resisting treatment due to drug resistance. Neisseria gonorrhoeae, the causative agent of gonorrhea is a common example. Gonorrhea was first treated successfully with sulfonamides in 1936, but by 1942 most strains were resistant and the drug then was penicillin. Within 16 years a penicillin-resistant strain - penicillinase-producing gonococcus emerged, and penicillin is no longer used to treat gonorrhea. Methicillin resistant S. aureus (MRSA) and Vancomycin resistant S. aureus (VRSA) strain are common now, they resist other antibiotics including ciprofloxacin, and penicillin. Vancomycin-resistant enterococci (VRE) is also very common.

There is a direct correlation between the daily use of antibiotics and the percent of resistant isolates. In 1946, almost all strains of Staphylococcus were penicillin sensitive. Today most hospital strains are resistant to penicillin G, and some also resistant to methicillin and/or gentamicin and only can be treated with Vancomycin. Some strains of Enterococcus have become resistant to most antibiotics, including Vancomycin. 

Multi-resistant Mycobacterium tuberculosis also is common. (MDR-TB -TB caused by bacteria that are resistant to at least two of the first-line TB antibiotics, isoniazid and rifampin. XDR-TB - a rare type of MDR-TB that is resistant to nearly all TB drugs. XDR-TB is caused by bacteria that are resistant to isoniazid and rifampin, and any fluoroquinolone and at least one of the three second-line injectable drugs).

Thus drug resistance is an extremely serious public health problem.

Factors contributing to drug resistance

·    Most serious problem arises from drug misuse such as the antibiotic prescriptions given in hospitals without clear evidence of infection or adequate medical indication. Antibacterial drugs administered to patients with colds, influenza, viral pneumonia, and other viral disease is a common example.

Frequently antibiotics are prescribed without culturing and identifying the pathogen or without determining bacterial sensitivity to the drug. Toxic, broad-spectrum antibiotics are sometimes given in place of narrow-spectrum drugs as a substitute for culture and sensitivity testing, with the consequent risk of dangerous side effects, opportunistic infections, and the selection of drug-resistant mutants.

·         The situation is made worse by patients not completing their course of medication. When antibiotic treatment is ended too early, drug-resistant mutants may survive.

·         Drugs are available without prescription to the public in many countries; people practicing self-administration of antibiotics further increase the prevalence of drug-resistant strains.

·         The use of antibiotics in animal feeds is  another contributing factor to increasing drug resistance.

The addition of low levels of antibiotics to livestock feeds raises the efficiency and rate of weight gain in cattle, pigs, and chickens (partially because of infection control in overcrowded animal populations). However, this also increases the number of drug-resistant bacteria in animal intestinal tracts. 

·         The spread of antibiotic resistance can be due to quite subtle factors. For example, products such as soap and deodorants often now contain triclosan and other germicides. The widespread use of triclosan favors an increase in antibiotic resistance

Drug Resistance        

Bacteria often become resistant in several different ways. Resistant mutants arise spontaneously and are then selected for in the presence of the drug.

A particular type of resistance mechanism is not confined to a single class of drugs. 

Two bacteria may use different resistance mechanisms to withstand the same chemotherapeutic agent. 



Bacteria can resist the action of antibiotics by

(1) preventing access to the target of the antibiotic

(2) altering target of the antibiotic

(3) degrading the antibiotic

(4) rapid expulsion of the antibiotic.

(5) alteration of susceptible enzymes

(6) alternate pathway to bypass the sequence inhibited 

1. Preventing access to (or altering) the target of the antibiotic

Pathogens often become resistant simply by preventing entrance of the drug.

  • Many gram-negative bacteria have an outer membrane which cannot be penetrated by penicillin G and hence are unaffected by it.
  • A decrease in permeability can lead to sulfonamide resistance.
  •  Mycobacteria resist many drugs because of the high content of mycolic acids in a complex lipid layer outside their peptidoglycan. This layer is impermeable to most water soluble drugs.
  • Genetic mutations that lead to changes in penicillin binding proteins also make a cell resistant.

2, Altering the target of the antibiotic

Antibiotics acts on a specific target. Resistance arises when the target enzyme or cellular structure is modified so that it is no longer susceptible to the drug. This drastically reduces antibiotic binding.

  • .      The affinity of ribosomes for erythromycin and chloramphenicol can be decreased by a change in the 23S rRNA to which they bind.
  • .      Enterococci become resistant to Vancomycin by changing the terminal D-alanine-D-alanine in their peptidoglycan to a D-alanine-D-lactate.

3. Expulsion/exclusion of Drugs

Another resistance strategy is to pump the drug out of the cell after it has entered. Some pathogens have plasma membrane translocases, often called efflux pumps that expel drugs. They are relatively nonspecific and can pump many different drugs. So, these transport proteins are called multidrug resistance pumps. Many are drug/proton antiporters—that is, protons enter the cell as the drug leaves. Such systems are present in E. coliP. aeruginosa, and S. aureus.

4. Inactivation of drugs through enzyme hydrolysis

Many bacterial pathogens resist attack by inactivating drugs using enzymatic hydrolysis. The hydrolysis of the β-lactam ring of penicillins by the enzyme penicillinase is a classical example.

5. Inactivation of drugs through chemical modification

Drugs are inactivated by the addition of chemical groups.

  • Chloramphenicol contains two hydroxyl groups that can be acetylated by the enzyme chloramphenicol acyltransferase with acetyl CoA as the donor.
  • Aminoglycosides can be modified and inactivated in several ways. Acetyltransferases catalyze the acetylation of amino groups. Some aminoglycoside modifying enzymes catalyze the addition of either phosphates (phosphotransferases) or adenyl groups (adenyltransferases) to hydroxyl groups.

6.   Alteration of susceptible enzymes

Antimetabolite action may be resisted through alteration of susceptible enzymes. In sulfonamide resistant bacteria, the enzyme-(dihydropteroic acid synthetase) that uses p-aminobenzoic acid during folic acid synthesis  often has a much lower affinity for sulfonamides.

 7. Alternate pathway to bypass the sequence inhibited by the agent or increase the production of the target metabolite

Resistant bacteria may either use an alternate pathway to bypass the sequence inhibited by the agent or increase the production of the target metabolite. For example, some bacteria are resistant to sulfonamides simply because they use preformed folic acid from their surroundings rather than synthesize it themselves. Other strains increase their rate of folic acid production and thus counteract sulfonamide inhibition.

The Origin and Transmission of Drug Resistance

Genes for drug resistance may be present on bacterial chromosomes, plasmids, transposons, and integrons. Because they are often found on mobile genetic elements (plasmids, transposons, and integrons), they can freely exchange between bacteria.

Spontaneous mutations in the bacterial chromosome, (although not very often) can make bacteria drug resistant. Usually such mutations result in a change in the drug target; therefore the antibiotic cannot bind and inhibit growth (e.g., the protein target to which streptomycin binds on bacterial ribosomes).

Many mutants are probably destroyed by natural host resistance mechanisms. However, when a patient is being treated extensively with antibiotics, some resistant mutants may survive and flourish because of their competitive advantage over nonresistant strains.

Frequently a bacterial pathogen is drug resistant because it has a plasmid bearing one or more resistance genes; such plasmids are called R plasmids (resistance plasmids)

Plasmid resistance genes often code for enzymes that destroy or modify drugs; for example, the hydrolysis of penicillin or the acetylation of chloramphenicol and aminoglycoside drugs. Plasmid associated genes have been implicated in resistance to the aminoglycosides, choramphenicol, penicillins and cephalosporins, erythromycin, tetracyclines, sulfonamides, and others. 

Once a bacterial cell possesses an R plasmid, the plasmid (or its genes) may be transferred to other cells quite rapidly through normal gene exchange processes such as conjugation, transduction, and transformation.

Because a single plasmid may carry genes for resistance to several drugs, a pathogen population can become resistant to several antibiotics simultaneously, even though the infected patient is being treated with only one drug.

Antibiotic resistance genes can be located on genetic elements other than plasmids such as 

1) composite transposons which bear more than one resistance gene. eg., Tn5 (kanamycin, bleomycin, streptomycin), Tn9 (chloramphenicol), Tn10 (tetracycline), Tn21 (streptomycin, spectinomycin, sulfonamide), Tn551 (erythromycin), and Tn4001 (gentamicin, tobramycin, kanamycin). Resistance genes on composite transposons can move rapidly between plasmids and through a bacterial population.

2) Several resistance genes are carried together as gene cassettes in association with a genetic element known as an integron. An integron is composed of an integrase gene and sequences for site-specific recombinationThus integrons also are important in spreading resistance genes.

3) Conjugative transposons, like composite transposons, can carry resistance genes. Because they are capable of moving between bacteria by conjugation, they are also effective in spreading resistance.

Strategies to reduce the emergence of drug resistance.

The drug can be given in a high enough concentration to destroy susceptible bacteria and most spontaneous mutants that might arise during treatment.

Sometimes two or even three different drugs can be administered simultaneously with the hope that each drug will prevent the emergence of resistance to the other. This approach is used in treating tuberculosis and malaria.

Finally, chemotherapeutic drugs, particularly broad-spectrum drugs, should be used only when definitely necessary. If possible, the pathogen should be identified, drug sensitivity tests run, and the proper narrow-spectrum drug employed.

But, despite efforts to control the emergence and spread of drug resistance, the situation continues to worsen. Antibiotics should be used in ways that reduce the development of resistance. Another approach is to search for new antibiotics that microorganisms have never encountered. Structure-based or rational drug design is a third option. 

Developing “enhancers”, which are cationic peptides that disrupt bacterial membranes by displacing their magnesium ions which help antibiotics to penetrate and rapidly exert their effects, is another approach.

Development of efflux-pump inhibitors to be given along with antibiotics to prevent their expulsion by the resistant pathogen is also useful.  

New antibiotics are developed that are effective against drug-resistant pathogens. 

Information that is coming from the sequencing and analysis of pathogen genomes is also useful in identifying new targets for antimicrobial drugs. 

Felix d’Herelle, one of the discoverers of bacterial viruses or bacteriophages, proposed that bacteriophages could be used to treat bacterial diseases. Currently Russian physicians use bacteriophages to treat many bacterial infections.  American companies are actively conducting research on phage therapy and preparing to carry out clinical trials.

 

Sunday, April 11, 2021

Antibiotics- Classification, Mode of actions, various generations of Antibiotics

Antimicrobial chemotherapy is the use of drugs to control  microorganisms for the prevention and treatment of disease.  The most successful drugs interfere with vital processes that differ between the pathogen and host, thereby seriously damaging the target microorganism while harming its host as little as possible.

Ideally, chemotherapeutic agents used to treat infectious disease destroy pathogenic microorganisms or inhibit their growth at concentrations low enough to avoid undesirable damage to the host. Most of these agents are antibiotics [Greek anti, against, and bios, life], microbial products or their derivatives that can kill susceptible microorganisms or inhibit their growth. Drugs such as the sulfonamides are examples of synthetic chemotherapeutic agents and are not microbially synthesized.

Chemotherapy

Paul Ehrlich is considered the father of the modern era of chemotherapy. Ehrlich was fascinated with dyes that specifically bind to and stain microbial cells-that would selectively destroy pathogens without harming human cells—a “magic bullet.” By 1904 Ehrlich found the dye trypan red active against the trypanosome that causes African sleeping sickness and arsphenamine (commercially, Salvarsan) active against the syphilis spirochete. In 1927, Gerhard Domagk discovered Prontosil Red, (the source of sulfonamides, or sulfa drugs) against pathogenic Streptococci and Staphylococci. Domagk received the 1939 Nobel Prize in Physiology or Medicine for his discovery of sulfonamides, or sulfa drugs. In the 1920s, Alexander Fleming, a Scottish physician, found that human tears contained a naturally occurring antibacterial substance that he termed “lysozyme.” The first true antibiotic Penicillin was later discovered by Fleming.

In 1896, by a 21-year-old French medical student named Ernest Duchesne had actually discovered penicillin but it was Fleming’s discovery which made it famous.  


Penicillium mold colony secretes penicillin that kills Staphylococcus aureus

 Fleming, Florey, and Chain received the Nobel Prize in 1945 for the discovery and production of penicillin. The discovery of penicillin stimulated the search for other antibiotics.

Selman Waksman announced in 1944 and his associates found a new antibiotic, streptomycin, produced by the actinomycete Streptomyces griseus. Streptomycin was the first drug that could successfully treat tuberculosis. Waksman received the Nobel Prize in 1952

Search for other antibiotic-producing soil microorganisms led to the isolation of chloramphenicol, neomycin and tetracycline by 1953. The discovery of chemotherapeutic agents and the development of newer, more powerful drugs have transformed modern medicine and greatly alleviated human suffering.

Characteristics of Antimicrobial Drugs

To be successful a chemotherapeutic agent must have selective toxicity: it must kill or inhibit the microbial pathogen while damaging the host as little as possible.

The degree of selective toxicity is expressed as

(1) the therapeutic dose, the drug level required for clinical treatment of a particular infection

(2) the toxic dose, the drug level at which the agent becomes too toxic for the host.

The therapeutic index is the ratio of the toxic dose to the therapeutic dose. The larger the therapeutic index, the better the chemotherapeutic agent (all other things being equal).

A drug that disrupts a microbial function not found in eucaryotic animal cells often has a greater selective toxicity and a higher therapeutic index. For example, penicillin inhibits bacterial cell wall peptidoglycan synthesis but has little effect on host cells because they lack cell walls; therefore penicillin’s therapeutic index is high. A drug which inhibits the same process in host cells or damages the host in other ways may have a low therapeutic index. The undesirable effects on the host, or side effects, are of many kinds and may involve almost any organ system. Because side effects can be severe, chemotherapeutic agents should be administered with great care.

Some bacteria and fungi are able to naturally produce many of the commonly employed antibiotics. In contrast, several important chemotherapeutic agents, such as sulfonamides, trimethoprim, chloramephenicol, ciprofloxacin, isoniazid, and dapsone, are synthetic—that is, manufactured by chemical procedures. Semisynthetic antibiotics are natural antibiotics that have been structurally modified by the addition of chemical groups which make them less susceptible to inactivation by pathogens (e.g., ampicillin, carbenicillin, and methicillin). Many semisynthetic drugs have a broader spectrum of antibiotic activity than their parent molecule. e.g., ampicillin, amoxycillin

 Microbial Sources of Some Antibiotics

Microorganism

Antibiotic

Actinomyces

 

Streptomyces spp.

Amphotericin B

Chloramphenicol (also synthetic)

Kanamycin

Neomycin

Nystatin

Rifampin

Streptomycin

Tetracyclines

Vancomycin

Bacteria

 

Micromonospora spp.

Gentamicin

Bacillus spp.

Bacitracin Polymyxins

Fungi

 

Penicillium spp.

Griseofulvin Penicillin

Cephalosporium spp.

Cephalosporins

 

 

Drugs have different range of effectiveness. Many are narrow-spectrum drugs— effective only against a limited variety of pathogens. Broad-spectrum drugs act against many different kinds of pathogens.

Drugs may also be classified based on the general microbial group they act against: antibacterial, antifungal, antiprotozoan, and antiviral. Some agents can be used against more than one group; for example, sulfonamides are active against bacteria and some protozoa.

Chemotherapeutic agents, like disinfectants, can be either cidal or static. Static agents reversibly inhibit growth; if the agent is removed, the microorganisms will recover and grow again. A cidal agent kills the target pathogen. The effect of an agent also varies with the target species: an agent may be cidal for one species and static for another. A static agent may not be effective if the host’s resistance is too low.

The minimal inhibition concentration (MIC) is the lowest concentration of a drug that prevents growth of a particular pathogen. The minimal lethal concentration (MLC) is the lowest drug concentration that kills the pathogen. A cidal drug generally kills pathogens at levels only two to four times the MIC, whereas a static agent kills at much higher concentrations.

 

ANTIBACTERIAL DRUGS

Antibiotics damage pathogens in several ways. Examples of antibiotics with the process inhibited, are the following: chloramphenicol (bacterial protein synthesis), cycloserine (peptidoglycan synthesis), nalidixic acid and novobiocin (bacterial DNA synthesis), rifampin (bacterial RNA synthesis), cycloheximide (eucaryotic protein synthesis), polyoxin D (fungal cell wall chitin synthesis), and cerulenin (fatty acid synthesis.

A few antibacterial drugs are described here, with emphasis on their mechanisms of action.

  1. Inhibitors of Cell Wall Synthesis
  2. Inhibitors of Protein Synthesis
  3. Inhibitors of Nucleic acid Synthesis
  4. Antimetabolites

Inhibitors of Cell Wall Synthesis 

The most selective antibiotics are those that interfere with bacterial cell wall synthesis. Drugs like penicillins, cephalosporins, vancomycin, and bacitracin have a high therapeutic index because they target structures not found in eukaryotic cells.

Penicillins

Most penicillins (e.g., penicillin G or benzylpenicillin) are derivatives of 6-aminopenicillanic acid and differ from one another with respect to the side chain attached to its amino group.  β-lactam ring,  is essential for bioactivity. Many penicillin-resistant bacteria produce penicillinase (β -lactamase), an enzyme that inactivates the antibiotic by hydrolyzing a bond in the β lactam ring.


Penicillin structure resemble the terminal D-alanyl-D-alanine found on the peptide side chain of the peptidoglycan subunit. This structural similarity blocks the enzyme catalyzing the transpeptidation reaction that forms the peptidoglycan cross-links. Thus formation of a complete cell wall is blocked, leading to osmotic lysis. Hence, penicillins act only on growing bacteria that are synthesizing new peptidoglycan.

Penicillins also bind to several periplasmic proteins (penicillin-binding proteins, or PBPs) and may also destroy bacteria by activating their own autolytic enzymes. Penicillin may stimulate special proteins called bacterial holins to form holes or lesions in the plasma membrane, leading directly to membrane leakage and death. 




The two naturally occurring penicillins, penicillin G and penicillin V, are narrow-spectrum drugs. Penicillin G is effective against gonococci, meningococci, and several gram-positive pathogens such as streptococci and staphylococci. However, it is destroyed by stomach acid and it must be administered by injection (parenterally). Penicillin V is similar to penicillin G in spectrum of activity, but can be given orally because it is more resistant to acid.

The semisynthetic penicillins,  have a broader spectrum of activity. Ampicillin can be administered orally and is effective against gram-negative bacteria such as Haemophilus, Salmonella, and Shigella. Carbenicillin and Ticarcillin are potent against Pseudomonas and Proteus.

Many bacteria have become resistant to natural penicillins and many of the semisynthetic analogs. Specific semisynthetic penicillins that are not destroyed by β -lactamases such as, methicillin, nafcillin, and oxacillin are used to combat antibiotic-resistant pathogens such as methicillin-resistant bacteria.

Although penicillins are the least toxic of the antibiotics, about 1 to 5% of the adults may be allergic to them. Occasionally, a person will die of a violent allergic response; therefore, patients should be questioned about penicillin allergies before treatment is begun.

Cephalosporins

Cephalosporins are a family of antibiotics originally isolated in 1948 from the fungus Cephalosporium acremonium. They contain a β -lactam structure that is very similar to that of the penicillins. Cephalosporins also inhibit the transpeptidation reaction during peptidoglycan synthesis. 

They are broad-spectrum drugs frequently given to patients with penicillin allergies (although about 10% of patients allergic to penicillin are also allergic to cephalosporins).

Cephalosporins are broadly categorized into generations (groups of drugs that are sequentially developed) based on their spectrum of activity.


First generation cephalosporins are more effective against Gram-positive organisms, such as staphylococci and streptococci, and minimal coverage against Gram-negative bacteria. Examples include cefazolin, cephalothin, cephradine, cefadroxil, and cephalexin.   

Second-generation drugs, developed after the first generation, have improved effects on gram negative bacteria with some anaerobe coverage. These cephalosporins are more effective against Gram-negative bacteria, but less effective against Gram-positive bacteria. Has better cell penetration. Increased resistance to beta lactamases. Examples include cefuroxime and cefprozil.

Third-generation drugs are  effective against gram-negative pathogens, and some reach the central nervous system. This is important because many antimicrobial agents do not cross the blood-brain barrier.  Examples include cefotaxime, ceftazidime, cefdinir, ceftriaxone, cefoperazone, and cefixime.  

Fourth-generation cephalosporins are broad spectrum with excellent gram-positive and gram-negative coverage and, like their third-generation predecessors, inhibit the growth of the difficult opportunistic pathogen Pseudomonas aeruginosaThese cephalosporins have an improved gram-positive spectrum while retaining the expanded gram-negative activity of the third generation. Wider spectrum of activity and improved resistance to beta lactamases. Examples include cefepime and cefpirome.  

Fifth generation These cephalosporins include ceftaroline and ceftobiprole. These are approved for treating critical infections, such as hospital-acquired pneumonia.

Vancomycin 

Vancomycin is a glycopeptide antibiotic produced by Streptomyces oreintalis. It is a cup-shaped molecule composed of a peptide linked to a disaccharide. 

Vancomycin’s peptide portion blocks the transpeptidation reaction by binding specifically to the D alanine-D-alanine terminal sequence on the pentapeptide portion of peptidoglycan. The antibiotic is bactericidal for Staphylococcus and some members of the genera Clostridium, Bacillus, Streptococcus, and Enterococcus. 

It is given both orally and intravenously and is important in the treatment of antibiotic resistant staphylococcal and enterococcal infections.

Vancomycin has been considered the “drug of last resort” in cases of antibiotic resistant S. aureus. However, vancomycin-resistant strains of Enterococcus and resistant Staphylococcus aureus (VRSA) are prevalent now

Teicoplanin 

Teicoplanin is a glycopeptide antibiotic from the actinomycete Actinoplanes teichomyceticus that is similar in structure and mechanism of action to vancomycin, but has fewer side effects. It is active against Staphylococci, Enterococci, Streptococci, Clostridia, Listeria, and many other gram-positive pathogens.

Protein Synthesis Inhibitors

Many antibiotics inhibit protein synthesis by binding with the prokaryotic ribosome. Because these drugs discriminate between prokaryotic and eucaryotic ribosomes, their therapeutic index is fairly high, but not as high as that of cell wall inhibitors. Some drugs bind to the 30S (small) ribosomal subunit, while others attach to the 50S (large) subunit. 

Several different steps in protein synthesis can be affected: aminoacyl-tRNA binding, peptide bond formation, mRNAreading, and translocation.

Aminoglycosides

Aminoglycoside antibiotics contain a cyclohexane ring and amino sugars. Streptomycin, kanamycin, neomycin, and tobramycin are synthesized by different Streptomyces species, whereas gentamicin comes from another actinomycete, Micromonospora purpurea

Aminoglycosides bind to the 30S (small) ribosomal subunit and interfere with protein synthesis by directly inhibiting the synthesis process and also by causing misreading of the mRNA. 

These antibiotics are bactericidal and are most effective against gram-negative pathogens. Streptomycin is effective in treating tuberculosis and but widespread drug resistance is a problem. Gentamicin is used to treat Proteus, Escherichia, Klebsiella, and Seratia infections. 

Aminoglycosides can be quite toxic, however, and can cause deafness, renal damage, loss of balance, nausea, and allergic responses.

Tetracyclines

The tetracyclines are a family of antibiotics with a common four ring structure to which a variety of side chains are attached. Oxytetracycline and chlortetracycline are produced naturally by Streptomyces species while others are semisynthetic drugs. 

These antibiotics are similar to the aminoglycosides and combine with the 30S (small) subunit of the ribosome. This inhibits the binding of aminoacyl-tRNA molecules to the A site of the ribosome. 

Because their action is only bacteriostatic, the effectiveness of treatment depends on active host immune system. 

Tetracyclines are broad-spectrum antibiotics that are active against gram-negative, as well as gram-positive bacteria, Rickettsias, Chlamydiae, and Mycoplasmas. High doses may result in nausea, diarrhea, yellowing of teeth in children, and damage to the liver and kidneys.

Macrolides

The macrolide antibiotics contain 12- to 22-carbon lactone rings linked to one or more sugars. 

Erythromycin is usually bacteriostatic and binds to the 23S rRNA of the 50S (large) ribosomal subunit to inhibit peptide chain elongation during protein synthesis. Erythromycin is a relatively broad-spectrum antibiotic effective against gram-positive bacteria, mycoplasmas, and a few gram-negative bacteria. It is used with patients who are allergic to penicillins and in the treatment of whooping cough, diphtheria, diarrhea caused by Campylobacter, and pneumonia from Legionella or Mycoplasma infections. 

Clindamycin is effective against a variety of bacteria including staphylococci, and anaerobes such as Bacteroides. Azithromycin, is particularly effective against Chlamydia trachomatis.

Chloramphenicol

Chloramphenicol was first produced from cultures of Streptomyces venezuelae but is now synthesized chemically. Like erythromycin, this antibiotic binds to 23S rRNA on the 50S ribosomal subunit to inhibit the peptidyl transferase reaction. It has a very broad spectrum of activity but, is quite toxic. Allergic responses or neurotoxic reactions may be seen. The most common side effect is depression of bone marrow function, leading to aplastic anemia and a decreased number of white blood cells. So, this antibiotic is used only in life-threatening situations when no other drug is adequate.

Metabolic Antagonists

Several  drugs act as antimetabolites—they antagonize, or block, the functioning of metabolic pathways by competitively inhibiting the use of metabolites by key enzymes. These drugs can act as structural analogs, molecules that are structurally similar to naturally occurring metabolic intermediates. These analogs compete with intermediates in metabolic processes because of their similarity, and prevent normal cellular metabolism. They are bacteriostatic and broad spectrum.

Sulfonamides or Sulfa Drugs 

The first antimetabolites to be used successfully as chemotherapeutic agents were the sulfonamides, discovered by G. Domagk. Sulfonamides, or sulfa drugs, are structurally related to sulfanilamide, an analog of p-aminobenzoic acid, or PABA.

PABA is used in the synthesis of the cofactor folic acid (folate). When sulfanilamide or another sulfonamide enters a bacterial cell, it competes with PABA for the active site of Dihydropteroate synthase, an enzyme involved in folic acid synthesis, causing a decline in folate concentration. Folic acid is a precursor of purines and pyrimidines, the bases used in the construction of DNA, RNA, and other important cell constituents so this decline is harmful to the bacterium. The resulting inhibition of purine and pyrimidine synthesis leads to inhibition of protein synthesis and DNA replication, thus the pathogen dies.

Sulfonamides thus have a high therapeutic index. Sulfonamides are selectively toxic for many pathogens because these bacteria manufacture their own fo late and cannot effectively take up this cofactor, whereas humans do not synthesize folate (we must obtain it in our diet). 

The increasing resistance of many bacteria to sulfa drugs limits their effectiveness. 5% of the patients receiving sulfa drugs experience adverse side effects, chiefly allergic responses such as fever, hives, and rashes.

Trimethoprim

Trimethoprim is a synthetic antibiotic that also interferes with the production of folic acid. It binds to dihydrofolate reductase (DHFR), the enzyme responsible for converting dihydrofolic acid to tetrahydrofolic acid, competing against the dihydrofolic acid substrate 

It is a broad-spectrum antibiotic often used to treat respiratory and middle ear infections, urinary tract infections, and traveler’s diarrhea. 

It can be combined with sulfa drugs to increase efficacy of treatment by blocking two key steps in the folic acid pathway.


The inhibition of two successive steps in a single biochemical pthway means that less of each drug is needed in combination than when used alone. This is termed a synergistic drug interaction.

The most common side effects associated with trimethoprim are abdominal pain, abnormal taste, diarrhea, loss of appetite, nausea, swelling of the tongue, and vomiting. Taking trimethoprim with food may reduce some of these side effects. Some patients are allergic to trimethoprim, exhibiting rash and itching. Some patients develop photosensitivity reactions (i.e., rashes due to sun exposure).

Nucleic Acid Synthesis Inhibition 

The antibacterial drugs that inhibit nucleic acid synthesis function by inhibiting DNA polymerase and DNA helicase or RNA polymerase, thus blocking processes of replication or transcription, respectively. These drugs are not as selectively toxic as other antibiotics because procaryotes and eucaryotes do not differ greatly with respect to nucleic acid synthesis.

Quinolones

The quinolones are synthetic drugs that contain the 4-quinolone ring. The quinolones are important antimicrobial agents that inhibit nucleic acid synthesis. The first quinolone, nalidixic acid, was synthesized in 1962. Since that time, generations of fluoroquinolones have been produced. Three of these— ciprofloxacin, norfloxacin, and ofloxacin—are currently used, and more fluoroquinolones are being synthesized and tested.

Quinolones act by inhibiting the bacterial DNA gyrase and topoisomerase II. DNA gyrase introduces negative twist in DNA and helps separate its strands. Inhibition of DNA gyrase disrupts DNA replication and repair, bacterial chromosome separation during division, and other cell processes involving DNA. Fluoroquinolones also inhibit topoisomerase II, another enzyme that untangles DNA during replication.

Quinolones are bactericidal. The quinolones are broad-spectrum antibiotics. They are highly effective against enteric bacteria such as E. coli and Klebsiella pneumoniae. They can be used with Haemophilus, Neiserria, P. aeruginosa, and other gram-negative pathogens. The quinolones also are active against gram-positive bacteria such as S. aureus, Streptococcus pyogenes, and Mycobacterium tuberculosis

They are used in treating urinary tract infections, sexually transmitted diseases caused by Neisseria and Chlamydia, gastrointestinal infections, respiratory infections, skin infections, and osteomyelitis (bone infection).

Quinolones are effective when administered orally but can sometimes cause diverse side effects, particularly gastrointestinal upset.

Properties of Some Common Antibacterial Drugs

Antibiotic Group

Primary Effect

Mechanism of Action

Members

Spectrum

Common Side Effects

Cell Wall Synthesis Inhibition

Penicillins

Cidal

Inhibit transpeptidation enzymes involved in the cross-linking polysaccharide chains of the bacterial cell wall peptidoglycan.

Activate cell wall lytic enzymes

Penicillin G, Penicillin V, Methicillin

Ampicillin, Carbenicillin

Narrow (gram-positive)

Broad (gram-positive, some gram-negative)

Allergic responses (diarrhea, anemia, hives, nausea, renal toxicity

Cephalosporins

 

Cidal

Same as above

Cephalothin, cefoxitin, cefaperazone, ceftriaxone

Broad (gram-positive, gram-negative)

Allergic responses, thrombophlebitis, renal injury

Vancomycin

 

Cidal

 

Prevents transpeptidation of peptidoglycan subunits by binding to D-Ala-D-Ala amino acids at the end of peptide cross-bridges. Thus it has a different binding site than that of the Penicillins

Vancomycin

Narrow (gram-positive)

Ototoxic (tinnitus and deafness), nephrotoxic, allergic reactions

Protein Synthesis Inhibition

Aminoglycosides

Cidal

Bind to small ribosomal subunit (30S) and interfere with protein synthesis directly inhibiting synthesis and causing misreading of mRNA

Neomycin, kanamycin, gentamicin,

 

 

Streptomycin

 

Broad (gram-negative, mycobacteria

 

Narrow (aerobic, gram-negative)

Deafness, renal damage, loss of balance, nausea, by allergic responses

 

Same as above

Tetracyclines

Static

Same as above

Oxytetracycline, chlortetracyclin

Broad (gram-positive and Gram-negative, rickettsia, chlamydia)

Gastrointestinal upset, teeth and discoloration, renal, hepatic injury

Macrolides

Static

Bind to 23S rRNA of large ribosomal subunit (50S) to inhibit peptide chain elongation during protein synthesis

Erythromycin, clindamycin

 

Broad (aerobic and anaerobic gram-positive, Some gram-negative)

Gastrointestinal upset, hepatic injury, anemia, allergic responses

Chloramphenicol

Static

Same as above

Chloramphenicol

Broad (gram-positive and negative, rickettsia and chlamydia)

Depressed bone marrow function, allergic reactions

Nucleic Acid Synthesis Inhibition

Quinolones and Fluoroquinolones

 

Cidal

Inhibit DNA gyrase topoisomerase IV, thereby blocking DNA replication and transcription

 

Norfloxacin, ciprofloxacin, Levofloxacin

Narrow (gram-negatives better than gram-positives) Broad spectrum

Tendonitis, headache, lightheadedness, convulsions, allergic reactions

Rifampin

 

Cidal

 

Inhibits bacterial DNA- dependent RNA polymerase

 

R-Cin, rifacilin, rifamycin, rimactane, rimpin, siticox

Mycobacterium infections and some gram-negative such as Neisseria meningitidis and Haemophilus influenzae

 

Nausea, vomiting, diarrhea, fatigue, anemia, drowsiness, headache, mouth ulceration, and liver damage

Cell Membrane Disruption

Polymyxin B

 

Cidal

Binds to plasma membrane and disrupts its structure and permeability properties

Polymyxin B, polymyxin topical ointment

Narrow—gram-negatives only

Can cause severe kidney damage, drowsiness, dizziness

 

Antimetabolites

Sulfonamides

 

Static

 

Inhibits folic acid synthesis by competing with ρ-aminobenzoic acid (PABA)

Silver sulfadiazin, sodium sulfacetamide, and  sulfamethoxazole, sulfanilamide, sulfasalazine, sulfisoxazole

Broad spectrum

 

Nausea, vomiting, diarrhea; hypersensitivity reactions such as rashes, photosensitivity

Trimethoprim

 

Static

 

Blocks folic acid synthesis by inhibiting the enzyme tetrahydrofolate reductase

Trimethoprim (in combination with sulfamethoxazole [1:5])

Broad spectrum

Same as sulfonamides, but less frequent

Dapsone

 

Static

Thought to interfere with folic acid synthesis

Dapsone

 

Narrow-mycobacterial infections, principally leprosy

Back, leg, or stomach pains; discolored fingernails, lips, or skin; breathing difficulties fever, loss of appetite, skin rash, fatigue

Isoniazid

 

Cidal if, bacteria are actively growing, static if bacteria are dormant

Exact mechanism is unclear but it is thought to inhibit lipid synthesis(especially mycolic acid); putative enoyl-reductase inhibitor

Isoniazid

Narrow—mycobacterial infections, principally  tuberculosis

Nausea, vomiting, liver damage, seizures, “pins and needles” in extremities (peripheral neuropathy)


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